Article

Usowicz, Maria M and Garden, Claire L P (2012) Increased excitability and altered action potential waveform in cerebellar granule neurons of the Ts65Dn mouse model of Down syndrome. Brain Research, 1465. pp. 10-17. ISSN 0006 8993

Sherry, Aileen E, Inglis, Neil F, Stevenson, Andy, Fraser-Pitt, Douglas J, Everest, Paul, Smith, David G E and Roberts, Mark (2011) Characterisation of proteins extracted from the surface of Salmonella Typhimurium grown under SPI-2-inducing conditions by LC-ESI/MS/MS sequencing. Proteomics, 11 (3). pp. 361-370.

Burgess, K E V, Lainson, A, Imrie, L, Fraser-Pitt, Douglas J, Yaga, R, Smith, David G E, Swart, R, Pitt, A R and Inglis, Neil F (2009) Performance of five different electrospray ionisation sources in conjunction with rapid monolithic column liquid chromatography and fast MS/MS scanning. Proteomics, 9 (6). pp. 1720-1726.

Fant, Xavier, Gnadt, Nicole, Haren, Laurence and Merdes, Andreas (2009) Stability of the small γ-tubulin complex requires HCA66, a protein of the centrosome and the nucleolus. Journal of Cell Science, 122 (8). pp. 1134-1144. ISSN 0021-9533

Clift, Martin James David, Rothen-Rutishauer, Barbara, Brown, David M, Duffin, Rodger, Donaldson, Ken, Proudfoot, Lorna, Guy, Keith and Stone, Vicki (2008) The impact of different nanoparticle surface chemistry and size on uptake and toxicity in a murine macrophage cell line. Toxicology and Applied Pharmacology, 232 (3). pp. 418-427. ISSN 1096-0333

Gilchrist, Jason (2007) Cooperative behaviour in cooperative breeders: Costs, benefits, and communal breeding. Behavioural Processes, 76 (2). 100 - 105. ISSN 03766357

Davidson, Keith, Gilpin, Linda, Hart, Mark C, Fouilland, Eric, Mitchell, Elaine, Calleja, Ignacio Alvarez, Laurent, Celine, Miller, Axel E J and Leakey, Raymond J G (2007) The influence of the balance of inorganic and organic nitrogen on the trophic dynamics of microbial food webs. Limnology & Oceanography, 52 (5). pp. 2147-2163. ISSN 0024-3590

Huxham, Mark, Kimani, E, Newton, J and Augley, J (2007) Stable isotope records from otoliths as tracers of fish migration in a mangrove system. Journal of Fish Biology, 70 (5). pp. 1554-1567. ISSN 0022-1112

Ford, Alex T, Martins, Irene and Fernandes, Teresa (2007) Population level effects of intersexuality in the marine environment. Science of The Total Environment, 374 (1). pp. 102-111. ISSN 0048 9697

Johnson, Stephen J, Barry, D A and Christofi, Nicholas (2007) Anaerobic biodegradation of linear alkylbenzene: Isomeric ratio as a monitoring tool. Land Contamination and Reclamation, 15 (2). pp. 235-241. ISSN 0967-0513

Tett, Paul, Gowen, Richard J, Mills, Dave, Fernandes, Teresa, Gilpin, Linda, Huxham, Mark, Kennington, Kevin, Read, P A, Service, Matthew, Wilkinson, Martin and Malcolm, Stephen J (2007) Defining and detecting undesirable disturbance in the context of eutrophication. Marine Pollution Bulletin, 55 (1-6). pp. 282-297. ISSN 0025 326X

Nielsen, Hanne Dalsgaard, Nielsen , Soren Laurentius and Madsen, Tom Vindbaek (2006) CO2 uptake patterns depend on water current velocity and shoot morphology in submerged stream macrophytes. Freshwater Biology, 51 (7). pp. 1331-1340. ISSN 1365 2427

Kennedy, Jessie, Hyam, Roger, Kukla, Robert and Paterson, Trevor (2006) A standard data model representation for taxonomic information. Omics: A Journal of Integrative Biology, 10 (2). pp. 220-230. ISSN 1536-2310

Huxham, Mark, Gilpin, Linda, Mocogni, Marina and Harper, S (2006) Microalgae, macrofauna and sedimentary stability: an experimental test of a reciprocal relationship. Marine Ecology Progress Series, 310. pp. 55-63. ISSN 1616 1599

Gowen, Richard J and Stewart, B M (2005) The Irish Sea: nutrient status and phytoplankton. Journal of Sea Research, 54 (1). pp. 36-50. ISSN 1385 1101

Craig, Paul, Kennedy, Jessie and Cumming, Andrew (2005) Time-series Explorer: An Animated Information Visualisation for Microarray Time-course Data. BMC Bioinformatics 2005, 6 (3). P8.

Dias, N, Goossens, J-F, Baldeyrou, B, Lansiaux, A, Colson, P, Di Salvo, A, Bernal, J, Turnbull, Agnes, Mincher, David and Bailly, C (2005) Oxoazabenzo[de]anthracenes conjugated to Amino Acids: Synthesis and evaluation as DNA-binding antitumor agents. Bioconjugate Chemistry, 16 (4). 949 - 958. ISSN 1043 1802

Hutchison, Gary R, Brown, David M, Hibbs, Leon R, Heal, Matthew R, Donaldson, Ken, Maynard, Robert L, Monaghan, Michelle, Nicholl, Andy and Stone, Vicki (2005) The effect of refurbishing a UK steel plant on PM10 metal composition and ability to induce inflammation. Respiratory Research, 6 (1). p. 43. ISSN 1465 9921

Graham, Martin and Kennedy, Jessie (2005) Extending taxonomic visualisation to incorporate synonymy and structural markers. Information Visualization, 4 (3). 206 - 223. ISSN 1473 8716

Nielsen, Hanne Dalsgaard and Nielsen , Soren Laurentius (2005) Photosynthetic responses to Cu2+ exposure are independent of light acclimation and uncoupled from growth inhibition in Fucus serratus (Phaeophyceae). Marine Pollution Bulletin, 51 (8-12). pp. 715-721. ISSN 0025 326X

Pullan, Martin R, Armstrong, Kate E, Paterson, Trevor, Cannon, Alan, Kennedy, Jessie, Watson, Mark F, McDonald, Sarah and Raguenaud, Cedric (2005) The Prometheus Description Model: An examination of the taxonomic description building process and its representation. Taxon, 54 (3). pp. 751-765. ISSN 0040-0262

Rae, Mick, Niven, D, Critchley, H O and Harlow, C R (2004) Antiinflammatory steroid action in human ovarian surface epithelial cells. Journal of Clinical Endocrinology and Metabolism, 89 (9). pp. 4538-4544. ISSN 0021-972X

El-Mansi, Mansi (2004) Flux to acetate and lactate excretions in industrial fermentations: Physiological and biochemical implications. Journal of Industrial Microbiology and Biotechnology, 31 (7). 295–300. ISSN 1367 5435

Gilpin, Linda, Davidson, Keith and Roberts, E C (2004) The influence of changes in nitrogen:silicon ratios on diatom growth dynamics. Journal of Sea Research, 51 (1). pp. 23-35. ISSN 1385 1101

Gowen, Richard J, Stewart, B M and Trimmer, M (2003) Changes in sediment processes across the western Irish Sea front. Estuarine Coastal and Shelf Science, 56 (5-6). pp. 1011-1019. ISSN 10960015

Onal, Hayri and Briers, Rob (2002) Incorporating spatial criteria into optimal reserve network selection. Proceedings of The Royal Society B Biological Sciences, 269 (1508). pp. 2437-2441. ISSN 0962-8452

Leaper, R and Huxham, Mark (2002) Size constraints in a real food web: predator, parasite and prey body-size relationships. Oikos, 99 (3). pp. 443-456. ISSN 16000706

Lee, Jae-Young, Tett, Paul, Jones, Ken, Jones, Sarah, Lutyen, Patrick, Smith, Claire and Wild-Allen, Karen (2002) The PROWQM physical-biological model with benthic-pelagic coupling applied to the northern North Sea. Journal of Sea Research, 48 (4). pp. 287-331. ISSN 13851101

Bolam, Stefan G and Fernandes, Teresa (2002) Dense aggregations of tube-building polychaetes: response to small-scale disturbances. Journal of Experimental Marine Biology and Ecology, 269 (2). pp. 197-222. ISSN 00220981

Raguenaud, Cedric, Pullan, Martin R, Watson, Mark F, Kennedy, Jessie, Newman, Mark F and Barclay, Peter (2002) Implementation of the Prometheus Taxonomic Model: a comparison of database models and query languages and an introduction to the Prometheus Object-Oriented Model. Taxon, 51 (1). pp. 131-142. ISSN 00400262

Simo, Rafael, Archer, Stephen D, Pedrós-Alió, Carlos, Gilpin, Linda and Stelfox-Widdicombe, Claire E (2002) Coupled dynamics of dimethylsulfoniopropionate and dimethylsulfide cycling and the microbial food web in surface waters of the North Atlantic. Limnology and Oceanography, 47 (1). pp. 53-61. ISSN 00243590

Briers, Rob (2002) Incorporating connectivity into reserve selection procedures. Biological Conservation, 103 (1). pp. 77-83. ISSN 00063207

Tett, Paul, Arístegui, J, Barton, D and Basterretxea, G (2002) Steady-state DCM dynamics in Canaries waters. Deep Sea Research Part II Topical Studies in Oceanography, 49 (17). pp. 3543-3559. ISSN 09670645

Fernandes, Teresa, Eleftheriou, A, Ackefors, H, Eleftheriou, M, Ervik, A, Sanchez-Mata, A, Scanlon, T, White, P, Cochrane, S, Pearson, T H and Read, P A (2001) The scientific principles underlying the monitoring of the environmental impacts of aquaculture. Journal of Applied Ichthyology, 17 (4). pp. 181-193. ISSN 14390426

Chamberlain, Jon, Fernandes, Teresa, Read, P A, Nickell, T D and Davies, Ivor (2001) The impact of biodeposits from suspended mussel (Mytilus edulis) culture on the surrounding surficial sediments. ICES Journal of Marine Science, 58 (2). pp. 411-416. ISSN 10959289

Velander, Kathy and Mocogni, Marina (2001) Seasonal variations in nutrient levels in Bemersyde Moss, Borders Region, Scotland. The Naturalist, 126 (1036). pp. 17-26. ISSN 0028-0771

Webb, L and Velander , Kathy (2000) Seasonal differences in the uitilisation of agricultural habitats by small rodents. Naturalist, 125 (1033). pp. 99-109.

Gibson, P, Robson, E and Armitage, Alistair (1999) Computer-aided identification of polychaetes. Newsletter of the Porcupine marine natural history society, 2. ISSN 1466-0369

Book Section

Craig, Paul and Kennedy, Jessie (2003) Coordinated graph and scatter-plot views for the visual exploration of microarray time-series data. In: IEEE Symposium on Information Visualization. INFOVIS . IEEE Computer Society Press, Seattle, Washington, USA, pp. 173-180. ISBN 1522-404x/0-7803-8154-8

Conference or Workshop Item

Lopez-Ibanez, Manuel, Prasad, T Devi and Paechter, Ben (2007) Solving optimal pump control problem using max-min ant system. In: 9th Annual Genetic and Evolutionary Computation Conference (GECCO), 2007, London.

Book

Kennedy, Jessie and Roerdink, Jos, eds. (2011) BioVis 2011 Conference Proceedings. IEEE Computer Society, Providence, RI, USA. ISBN 978-1-4673-0002-5

Thesis

Lang'at, J K S (2013) Impacts of tree harvesting on the carbon balance and functioning in mangrove forests. PhD thesis, Edinburgh Napier University.

Spielmann, Guillaume (2012) The impact of exercise, adiposity and persistent viral infection on blood T-Cell phenotype and function. PhD thesis, Edinburgh Napier University.

Riley, Chris W (2012) User-Centric Biometrics: Authentication in a Self-Service Environment. PhD thesis, Edinburgh Napier University.

Whyte, Callum T (2012) An Investigation into changes in the phytoplankton community in Loch Creran, a Scottish sea loch. PhD thesis, Edinburgh Napier University.

Capuzzo, Elisa (2011) Measuring and modelling the primary production of a sea lough in Northern Ireland. PhD thesis, Edinburgh Napier University.

Rosenkranz, Philipp (2010) The ecotoxicology of nanoparticles in Daphnia magna. PhD thesis, Edinburgh Napier University.

Brito, Ana C (2010) The development of an assimilative capacity model for the sustainable management of nutrients within the Ria Formosa in southern Portugal. PhD thesis, Edinburgh Napier University.

Whomersley, Paul (2009) Uses of benthic ecology in the assessment of anthropogenic impacts in the marine environment. PhD thesis, Edinburgh Napier University.

Zhao, Min (2009) INHIBITION OF LIPOPOLYSACCHARIDE-INDUCED INFLAMMATION BY NIPPOSTRONGYLUS BRASILIENSIS LARVAE AND EXCRETORY-SECRETORY PRODUCTS (ES). PhD thesis, Edinburgh Napier University.

Cosgrove, Cormac (2008) Investigating the frequency of senescent T lymphocytes with ageing, exercise and obesity. PhD thesis, Napier University .

Fanget, Nicolas (2008) Starvation/stationary phase survival of Rhodococcus erythropolis SQ1: a physiological and genetic analysis. PhD thesis, Napier University.

Graham, Martin (2001) Visualising multiple overlapping classification hierarchies. PhD thesis, Napier University.

Bolam, Stefan G (1999) AN INVESTIGATION INTO THE PROCESSES RESPONSIBLE FOR THE GENERATION OF THE SPATIAL PATTERN OF THE SPIONID POLYCHAETE PYGOSPIO ELEGANS CLAPAREDE. PhD thesis, Napier University.

Brown, Lyndesay M (1997) Measurement of the demographic parameters of the Mute Swan Cygnus Olor population in the Lothians. PhD thesis, Napier University.

Scott, Kenneth A (1997) Nutrient characteristics of urban stormwater detention ponds on the Canadian Prairies. PhD thesis, Edinburgh Napier University.

Kinross, John Henri (1991) The effect of acidification on epilithic algae in the Loch Ard catchment. PhD thesis, Napier Polytechnic of Edinburgh.