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Pattern browsing and query adjustment for the exploratory analysis and cooperative visualisation of microarray time-course data.

Craig, Paul, Cannon, Alan, Kennedy, Jessie and Kukla, Robert (2010) Pattern browsing and query adjustment for the exploratory analysis and cooperative visualisation of microarray time-course data. In: Cooperative Design, Visualization, and Engineering. Lecture Notes in Computer Science (6240). Springer, Mallorca, Spain, pp. 199-206. ISBN 978-3642160653

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Abstract/Description

This paper presents work to support collaborative visualisation and data analysis in the microarray time-series explorer (MaTSE) software. We introduce a novel visualisation component called the ‘pattern browser’ which is used to support the annotation and adjustment of user queries. This includes an explanation of why this component is required and how it can be used with our online pattern repository by biologists collaborating in the analysis of a microarray time-course data set. To conclude we suggest which other types of collaborative visualisation would benefit from the introduction of a component with comparable functionality.

Item Type: Book Section
ISBN: 978-3642160653
Uncontrolled Keywords: Cooperative visualisation; combined multiple views; bioinformatics; microarray data analysis;
University Divisions/Research Centres: Faculty of Engineering, Computing and Creative Industries > School of Computing
Dewey Decimal Subjects: 500 Science > 570 Life sciences; biology > 572 Biochemistry
Library of Congress Subjects: Q Science > QH Natural history
Item ID: 3890
Depositing User: Computing Research
Date Deposited: 03 Feb 2011 16:02
Last Modified: 19 Nov 2013 11:44
URI: http://researchrepository.napier.ac.uk/id/eprint/3890

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